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  5. lcl|LHPG02000005.1_cds_PRW58209.1_7582

lcl|LHPG02000005.1_cds_PRW58209.1_7582 (PRW58209)


Aliases : PRW58209

Description : Squamosa promoter-binding 19


Gene families : OG_01_0000101 (OrthoFinder) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58209.1_7582
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cz05g23090.t1 No alias BTB/Kelch-associated; BTB/POZ domain; SBP domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_80746 80746 SBP domain [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0008.1 32891235 SBP domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
InterPro domains Description Start Stop
IPR004333 SBP_dom 399 468
IPR004333 SBP_dom 19 88
No external refs found!