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  5. lcl|LHPG02000005.1_cds_PRW58148.1_7665

lcl|LHPG02000005.1_cds_PRW58148.1_7665 (PRW58148)


Aliases : PRW58148

Description : Multiple RNA-binding domain-containing 1


Gene families : OG_01_0003158 (OrthoFinder) Phylogenetic Tree(s): OG0003158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000005.1_cds_PRW58148.1_7665
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000893.5 tig00000893_g5348.t1 No description available 0.06 OrthoFinder
Cre16.g685200 30778004 No description available 0.14 OrthoFinder
Cz03g11190.t1 No alias RNA recognition motif domain [Interproscan]. 0.15 OrthoFinder
EOD12070 No alias RNA recognition motif domain [Interproscan]. 0.09 OrthoFinder
PTI_10G00250.1 No alias RNA recognition motif domain [Interproscan]. 0.11 OrthoFinder
Sro737_g195080.1 Contig1367.g12567 Multiple RNA-binding domain-containing protein 1 0.09 OrthoFinder
TP04G04110.1 No alias RNA recognition motif domain [Interproscan]. 0.07 OrthoFinder
XM_002501431.1 MICPUN_81062, 81062 RNA recognition motif domain [Interproscan]. 0.13 OrthoFinder
XM_003057974.1 MicpuC2_16164, 16164 RNA recognition motif domain [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01001092.1_cds_GFH17076.1_11553 HaLaN_13623, GFH17076 RRM domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0042274 ribosomal small subunit biogenesis IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0042822 pyridoxal phosphate metabolic process IEP Enrichment
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046184 aldehyde biosynthetic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 656 714
IPR000504 RRM_dom 914 981
IPR000504 RRM_dom 806 883
IPR000504 RRM_dom 39 104
IPR000504 RRM_dom 451 521
No external refs found!