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  5. lcl|LHPG02000004.1_cds_PRW59438.1_7304

lcl|LHPG02000004.1_cds_PRW59438.1_7304 (PRW59438)


Aliases : PRW59438

Description : 40S ribosomal S19-1


Gene families : OG_01_0003297 (OrthoFinder) Phylogenetic Tree(s): OG0003297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW59438.1_7304
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021017.6 tig00021017_g17179.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder
Cre02.g106600 30784812, RPS19 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder
Cz11g12080.t1 No alias Ribosomal protein S19e [Interproscan]. 0.04 OrthoFinder
Dusal.1308s00001.1 33194138 Ribosomal protein S19e [Interproscan]. 0.09 OrthoFinder
EOD40848 No alias Ribosomal protein S19e [Interproscan]. 0.03 OrthoFinder
OT_11G02460.1 No alias Ribosomal protein S19e [Interproscan]. 0.02 OrthoFinder
PTI_13G03570.1 No alias Ribosomal protein S19e [Interproscan]. 0.05 OrthoFinder
Sro345_g122470.1 Contig2266.g18806 40S ribosomal protein S19 0.05 OrthoFinder
TP05G07890.1 No alias Ribosomal protein S19e [Interproscan]. 0.05 OrthoFinder
XM_002509176.1 MICPUN_107171, 107171 Ribosomal protein S19e [Interproscan]. 0.05 OrthoFinder
XM_003061489.1 MicpuC2_49693, 49693 Ribosomal protein S19e [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000010.1_cds_GFH05838.1_315 HaLaN_00368, GFH05838 Ribosomal protein S19e [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494467.1_2997 KAA8494467 40S ribosomal protein S19-1 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 8 145
No external refs found!