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  5. lcl|LHPG02000004.1_cds_PRW59356.1_7409

lcl|LHPG02000004.1_cds_PRW59356.1_7409 (PRW59356)


Aliases : PRW59356

Description : DEAD box RNA helicase isoform B


Gene families : OG_01_0001406 (OrthoFinder) Phylogenetic Tree(s): OG0001406_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW59356.1_7409
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Sro89_g047180.1 Contig3846.g29639 Dependent RNA helicase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0017128 phospholipid scramblase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140303 intramembrane lipid transporter activity IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 1114 1283
IPR009723 Pop1_N 1351 1558
IPR001650 Helicase_C 185 295
IPR012590 POPLD_dom 1732 1807
IPR011545 DEAD/DEAH_box_helicase_dom 3 144
No external refs found!