1. Home
  2. Species
  3. Chlorella sorokiniana
  4. Sequence
  5. lcl|LHPG02000004.1_cds_PRW59349.1_7459

lcl|LHPG02000004.1_cds_PRW59349.1_7459 (PRW59349)


Aliases : PRW59349

Description : Cobalamin biosynthesis


Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW59349.1_7459
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
PTI_21G02060.1 No alias Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.02 OrthoFinder
SymbC1.scaffold3924.2 3924.2 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.02 OrthoFinder
SymbC1.scaffold6463.2 6463.2 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.03 OrthoFinder
Transcript_contig_56965 56965 CobW/HypB/UreG, nucleotide-binding domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR011629 Cbl_biosynth_CobW-like_C 296 394
IPR003495 CobW/HypB/UreG_dom 8 190
No external refs found!