Aliases : PRW59229
Description : Small nuclear ribonucleo Sm D3
Gene families : OG_01_0000904 (OrthoFinder) Phylogenetic Tree(s): OG0000904_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|LHPG02000004.1_cds_PRW59229.1_7217 | |
Cluster | HCCA: Cluster_47 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000480.60 | tig00000480_g1327.t1 | RNA processing.RNA splicing.U6-associated LSm accessory... | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00020912.17 | tig00020912_g15787.t1 | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder | |
Cre10.g455300 | 30789915 | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder | |
Dusal.0437s00010.1 | 33198266 | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder | |
TP13G00410.1 | No alias | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder | |
Transcript_contig_59145 | 59145 | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder | |
UNPLg00366.t1 | No alias | LSM domain, eukaryotic/archaea-type [Interproscan]. | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | Enrichment |
BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
BP | GO:0006450 | regulation of translational fidelity | IEP | Enrichment |
BP | GO:0006476 | protein deacetylation | IEP | Enrichment |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
BP | GO:0010639 | negative regulation of organelle organization | IEP | Enrichment |
MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015689 | molybdate ion transport | IEP | Enrichment |
BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
BP | GO:0016570 | histone modification | IEP | Enrichment |
BP | GO:0016575 | histone deacetylation | IEP | Enrichment |
BP | GO:0032780 | negative regulation of ATPase activity | IEP | Enrichment |
BP | GO:0033043 | regulation of organelle organization | IEP | Enrichment |
BP | GO:0033044 | regulation of chromosome organization | IEP | Enrichment |
BP | GO:0035601 | protein deacylation | IEP | Enrichment |
MF | GO:0038024 | cargo receptor activity | IEP | Enrichment |
CC | GO:0042555 | MCM complex | IEP | Enrichment |
BP | GO:0043086 | negative regulation of catalytic activity | IEP | Enrichment |
BP | GO:0043462 | regulation of ATPase activity | IEP | Enrichment |
BP | GO:0044092 | negative regulation of molecular function | IEP | Enrichment |
BP | GO:0048523 | negative regulation of cellular process | IEP | Enrichment |
BP | GO:0050790 | regulation of catalytic activity | IEP | Enrichment |
BP | GO:0051095 | regulation of helicase activity | IEP | Enrichment |
BP | GO:0051097 | negative regulation of helicase activity | IEP | Enrichment |
BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
BP | GO:0051129 | negative regulation of cellular component organization | IEP | Enrichment |
BP | GO:0065009 | regulation of molecular function | IEP | Enrichment |
MF | GO:0097020 | COPII receptor activity | IEP | Enrichment |
BP | GO:0098732 | macromolecule deacylation | IEP | Enrichment |
BP | GO:1905462 | regulation of DNA duplex unwinding | IEP | Enrichment |
BP | GO:1905463 | negative regulation of DNA duplex unwinding | IEP | Enrichment |
BP | GO:1905774 | regulation of DNA helicase activity | IEP | Enrichment |
BP | GO:1905775 | negative regulation of DNA helicase activity | IEP | Enrichment |
BP | GO:2001251 | negative regulation of chromosome organization | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001163 | LSM_dom_euk/arc | 18 | 81 |
No external refs found! |