lcl|LHPG02000004.1_cds_PRW59221.1_7052 (PRW59221)


Aliases : PRW59221

Description : DNA replication licensing factor MCM4


Gene families : OG_01_0002239 (OrthoFinder) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW59221.1_7052
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.164 tig00000144_g9157.t1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.06 OrthoFinder
Cre07.g316850 30774860, MCM4 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.11 OrthoFinder
Cz01g46020.t1 No alias MCM, AAA-lid domain; MCM domain [Interproscan]. 0.07 OrthoFinder
Cz01g46030.t1 No alias MCM N-terminal domain; MCM OB domain; MCM domain [Interproscan]. 0.04 OrthoFinder
EOD16047 No alias MCM, AAA-lid domain; MCM domain [Interproscan]. 0.04 OrthoFinder
EOD37691 No alias MCM OB domain; MCM, AAA-lid domain; MCM domain [Interproscan]. 0.03 OrthoFinder
OT_14G01130.1 No alias MCM, AAA-lid domain; MCM domain; MCM N-terminal domain;... 0.05 OrthoFinder
Sro408_g136940.1 Contig3193.g25229 Licensing factor MCM4 0.02 OrthoFinder
Transcript_contig_53744 53744 MCM domain; MCM N-terminal domain; MCM OB domain [Interproscan]. 0.09 OrthoFinder
Vocar.0003s0114.1 32889118 MCM, AAA-lid domain; MCM N-terminal domain; MCM OB... 0.06 OrthoFinder
lcl|BLLF01000050.1_cds_GFH06666.1_1143 HaLaN_01335, GFH06666 DNA helicase 0.02 OrthoFinder
lcl|BLLF01002444.1_cds_GFH24102.1_18579 HaLaN_21829, GFH24102 DNA helicase 0.05 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492449.1_9142 KAA8492449 DNA replication licensing factor mcm4-B 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006270 DNA replication initiation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022414 reproductive process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
BP GO:0032780 negative regulation of ATPase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
CC GO:0042555 MCM complex IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043086 negative regulation of catalytic activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043462 regulation of ATPase activity IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044092 negative regulation of molecular function IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045132 meiotic chromosome segregation IEP Enrichment
MF GO:0045735 nutrient reservoir activity IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0051095 regulation of helicase activity IEP Enrichment
BP GO:0051097 negative regulation of helicase activity IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
BP GO:0098813 nuclear chromosome segregation IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
BP GO:1903046 meiotic cell cycle process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
BP GO:1905462 regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905774 regulation of DNA helicase activity IEP Enrichment
BP GO:1905775 negative regulation of DNA helicase activity IEP Enrichment
BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR001208 MCM_dom 441 660
IPR027925 MCM_N 131 214
IPR041562 MCM_lid 678 761
IPR033762 MCM_OB 230 357
No external refs found!