lcl|LHPG02000004.1_cds_PRW59206.1_7480 (PRW59206)

Aliases : PRW59206

Description : Embryonic stem cell-specific 5-hydroxymethylcytosine-binding-like

Gene families : OG_01_0002498 (OrthoFinder) Phylogenetic Tree(s): OG0002498_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000004.1_cds_PRW59206.1_7480
Cluster	HCCA: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method	Actions
lcl\|VRMN01000008.1_cds_KAA8493062.1_2798	KAA8493062	Putative SOS response-associated peptidase yoqW	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003697	single-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018142	protein-DNA covalent cross-linking	IEA	Interproscan
BP	GO:0018143	nucleic acid-protein covalent cross-linking	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006835	dicarboxylic acid transport	IEP	Enrichment
BP	GO:0015711	organic anion transport	IEP	Enrichment
BP	GO:0015740	C4-dicarboxylate transport	IEP	Enrichment
BP	GO:0015743	malate transport	IEP	Enrichment
CC	GO:0018995	host cellular component	IEP	Enrichment
BP	GO:0019321	pentose metabolic process	IEP	Enrichment
BP	GO:0019566	arabinose metabolic process	IEP	Enrichment
MF	GO:0019825	oxygen binding	IEP	Enrichment
CC	GO:0033643	host cell part	IEP	Enrichment
CC	GO:0033646	host intracellular part	IEP	Enrichment
CC	GO:0033647	host intracellular organelle	IEP	Enrichment
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Enrichment
CC	GO:0042025	host cell nucleus	IEP	Enrichment
BP	GO:0046373	L-arabinose metabolic process	IEP	Enrichment
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Enrichment
BP	GO:0046942	carboxylic acid transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003738	SRAP	1	244

External Links

No external refs found!

lcl|LHPG02000004.1_cds_PRW59206.1_7480 (PRW59206)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation