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  5. lcl|LHPG02000004.1_cds_PRW58899.1_7019

lcl|LHPG02000004.1_cds_PRW58899.1_7019 (PRW58899)


Aliases : PRW58899

Description : Rubisco small subunit N-methyltransferase


Gene families : OG_01_0000712 (OrthoFinder) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW58899.1_7019
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000658.25 tig00000658_g2915.t1 Ribulose-1,5 bisphosphate carboxylase/oxygenase large... 0.02 OrthoFinder
Cre12.g524500 30793297, RMT2 No description available 0.05 OrthoFinder
OT_09G03150.1 No alias SET domain; Rubisco LSMT, substrate-binding domain... 0.05 OrthoFinder
Vocar.0037s0009.1 32897497 SET domain; Rubisco LSMT, substrate-binding domain... 0.05 OrthoFinder
XM_002508478.1 MICPUN_97985, 97985 Set domain protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR015353 Rubisco_LSMT_subst-bd 331 446
No external refs found!