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  5. lcl|LHPG02000004.1_cds_PRW58875.1_7566

lcl|LHPG02000004.1_cds_PRW58875.1_7566 (PRW58875)


Aliases : PRW58875

Description : UVR3 3-like 6-4 DNA photolyase


Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW58875.1_7566
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre12.g534550 30792025 Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Sro82_g043740.1 Contig4032.g30965 Cryptochrome-1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
InterPro domains Description Start Stop
IPR011083 Phage_tail_collar_dom 32 82
IPR005101 Cryptochr/Photolyase_FAD-bd 388 585
IPR006050 DNA_photolyase_N 106 267
No external refs found!