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  5. lcl|LHPG02000004.1_cds_PRW58824.1_7345

lcl|LHPG02000004.1_cds_PRW58824.1_7345 (PRW58824)


Aliases : PRW58824

Description : 60S ribosomal L13a-4


Gene families : OG_01_0003121 (OrthoFinder) Phylogenetic Tree(s): OG0003121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW58824.1_7345
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000792.29 tig00000792_g4178.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder
Cre12.g532550 30791692, RPL13a Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder
Cz05g22130.t1 No alias Hypothetical protein 0.03 OrthoFinder
EOD25270 No alias Ribosomal protein L13 [Interproscan]. 0.03 OrthoFinder
EOD35558 No alias Ribosomal protein L13 [Interproscan]. 0.03 OrthoFinder
OT_12G02420.1 No alias Ribosomal protein L13 [Interproscan]. 0.09 OrthoFinder
PTI_02G04390.1 No alias Ribosomal protein L13 [Interproscan]. 0.11 OrthoFinder
Sro678_g186000.1 Contig2726.g21985 60S ribosomal protein L13a (Fragment) 0.12 OrthoFinder
SymbC1.scaffold1593.4 1593.4 Hypothetical protein 0.02 OrthoFinder
TP04G09050.1 No alias Hypothetical protein 0.12 OrthoFinder
Vocar.0017s0012.1 32891353 Ribosomal protein L13 [Interproscan]. 0.04 OrthoFinder
XM_002507201.1 MICPUN_93104, 93104 Ribosomal protein L13 [Interproscan]. 0.1 OrthoFinder
XM_003054776.1 MicpuC2_30605, 30605 Ribosomal protein L13 [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497918.1_6871 KAA8497918 60S ribosomal protein L13a 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 6 112
No external refs found!