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  5. lcl|LHPG02000004.1_cds_PRW58740.1_7494

lcl|LHPG02000004.1_cds_PRW58740.1_7494 (PRW58740)


Aliases : PRW58740

Description : DNA polymerase eta isoform B


Gene families : OG_01_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW58740.1_7494
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cz05g14110.t1 No alias DNA polymerase, Y-family, little finger domain [Interproscan]. 0.02 OrthoFinder
Cz05g14120.t1 No alias UmuC domain [Interproscan]. 0.02 OrthoFinder
Cz10g08260.t1 No alias Zinc-finger domain of monoamine-oxidase A repressor R1... 0.03 OrthoFinder
EOD38954 No alias UmuC domain [Interproscan]. 0.02 OrthoFinder
OT_11G01750.1 No alias DNA polymerase, Y-family, little finger domain; UmuC... 0.03 OrthoFinder
Vocar.0006s0475.1 32894021 DNA polymerase, Y-family, little finger domain [Interproscan]. 0.02 OrthoFinder
Vocar.0023s0208.1 32883266 DNA polymerase, Y-family, little finger domain; UmuC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP Enrichment
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0004376 glycolipid mannosyltransferase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
BP GO:0031329 regulation of cellular catabolic process IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0043487 regulation of RNA stability IEP Enrichment
BP GO:0043488 regulation of mRNA stability IEP Enrichment
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Enrichment
BP GO:0061013 regulation of mRNA catabolic process IEP Enrichment
BP GO:1903311 regulation of mRNA metabolic process IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR001126 UmuC 1886 2093
IPR024728 PolY_HhH_motif 2109 2138
IPR017961 DNA_pol_Y-fam_little_finger 2176 2307
IPR003347 JmjC_dom 1693 1742
No external refs found!