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  5. lcl|LHPG02000004.1_cds_PRW58739.1_7495

lcl|LHPG02000004.1_cds_PRW58739.1_7495 (PRW58739)


Aliases : PRW58739

Description : DNA polymerase eta isoform C


Gene families : OG_01_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW58739.1_7495
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Cz04g10150.t1 No alias DNA polymerase type-Y, HhH motif; UmuC domain; DNA... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR024728 PolY_HhH_motif 2135 2164
IPR017961 DNA_pol_Y-fam_little_finger 2202 2333
IPR003347 JmjC_dom 1719 1768
IPR001126 UmuC 1912 2119
No external refs found!