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  5. lcl|LHPG02000004.1_cds_PRW58738.1_7493

lcl|LHPG02000004.1_cds_PRW58738.1_7493 (PRW58738)


Aliases : PRW58738

Description : DNA polymerase eta isoform A


Gene families : OG_01_0000380 (OrthoFinder) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000004.1_cds_PRW58738.1_7493
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cre07.g338602 30775374 DNA damage response.DNA repair polymerase activities.DNA... 0.02 OrthoFinder
Cz05g14110.t1 No alias DNA polymerase, Y-family, little finger domain [Interproscan]. 0.03 OrthoFinder
EOD38954 No alias UmuC domain [Interproscan]. 0.01 OrthoFinder
OT_11G01750.1 No alias DNA polymerase, Y-family, little finger domain; UmuC... 0.03 OrthoFinder
Transcript_contig_89351 89351 DNA polymerase, Y-family, little finger domain; UmuC... 0.02 OrthoFinder
Transcript_contig_90956 90956 Hypothetical protein 0.01 OrthoFinder
Vocar.0023s0208.1 32883266 DNA polymerase, Y-family, little finger domain; UmuC... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP Enrichment
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004376 glycolipid mannosyltransferase activity IEP Enrichment
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Enrichment
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0034311 diol metabolic process IEP Enrichment
BP GO:0034312 diol biosynthetic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR024728 PolY_HhH_motif 2100 2129
IPR017961 DNA_pol_Y-fam_little_finger 2167 2298
IPR003347 JmjC_dom 1693 1742
IPR001126 UmuC 1877 2084
No external refs found!