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  5. lcl|LHPG02000003.1_cds_PRW60174.1_6320

lcl|LHPG02000003.1_cds_PRW60174.1_6320 (PRW60174)


Aliases : PRW60174

Description : D111 G-patch domain-containing family


Gene families : OG_01_0002250 (OrthoFinder) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000003.1_cds_PRW60174.1_6320
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Cre07.g347400 30774277 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cz02g35040.t1 No alias G-patch domain [Interproscan]. 0.05 OrthoFinder
Dusal.0185s00003.1 33185832 G-patch domain [Interproscan]. 0.03 OrthoFinder
OT_01G03500.1 No alias G-patch domain [Interproscan]. 0.04 OrthoFinder
PTI_04G04430.1 No alias G-patch domain [Interproscan]. 0.03 OrthoFinder
Sro650_g181440.1 Contig647.g7760 PIN2/TERF1-interacting telomerase inhibitor 1 0.04 OrthoFinder
TP01G00520.1 No alias G-patch domain [Interproscan]. 0.04 OrthoFinder
TP03G08160.1 No alias G-patch domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54158 54158 G-patch domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000469 cleavage involved in rRNA processing IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0042274 ribosomal small subunit biogenesis IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Enrichment
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000467 G_patch_dom 25 67
No external refs found!