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  5. lcl|LHPG02000003.1_cds_PRW60169.1_6734

lcl|LHPG02000003.1_cds_PRW60169.1_6734 (PRW60169)


Aliases : PRW60169

Description : Retinol dehydrogenase 13


Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000003.1_cds_PRW60169.1_6734
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000227.39 tig00000227_g19830.t1 Short-chain dehydrogenase TIC 32, chloroplastic... 0.01 OrthoFinder
Cre11.g480650 30775893 Dehydrogenase/reductase SDR family member FEY... 0.02 OrthoFinder
OT_04G04490.1 No alias Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
Sro190_g081950.1 Contig3488.g27070 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.01 OrthoFinder
Sro389_g132520.1 Contig669.g7869 Daunorubicin C-13 ketoreductase DnrU 0.02 OrthoFinder
Sro3965_g352250.1 Contig1669.g15029 Dehydrogenase/reductase SDR family member on chromosome X homolog 0.02 OrthoFinder
lcl|BLLF01000239.1_cds_GFH09494.1_3971 HaLaN_04650, GFH09494 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006848 pyruvate transport IEP Enrichment
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:1901475 pyruvate transmembrane transport IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 70 274
No external refs found!