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  5. lcl|LHPG02000003.1_cds_PRW60132.1_6528

lcl|LHPG02000003.1_cds_PRW60132.1_6528 (PRW60132)


Aliases : PRW60132

Description : 60S ribosomal L15


Gene families : OG_01_0002964 (OrthoFinder) Phylogenetic Tree(s): OG0002964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000003.1_cds_PRW60132.1_6528
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000310.75 tig00000310_g24000.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder
Cre02.g091100 30785346, RPL15 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cz06g21030.t1 No alias Ribosomal protein L15e [Interproscan]. 0.18 OrthoFinder
Cz06g21040.t1 No alias Ribosomal protein L15e [Interproscan]. 0.1 OrthoFinder
Dusal.0088s00017.1 33203549 Ribosomal protein L15e [Interproscan]. 0.17 OrthoFinder
OT_02G04150.1 No alias Ribosomal protein L15e [Interproscan]. 0.06 OrthoFinder
PTI_03G02920.1 No alias Ribosomal protein L15e [Interproscan]. 0.29 OrthoFinder
Sro827_g207900.1 Contig2896.g23095 60S ribosomal protein L15 0.26 OrthoFinder
TP01G10080.1 No alias Ribosomal protein L15e [Interproscan]. 0.15 OrthoFinder
Transcript_contig_90471 90471 Ribosomal protein L15e [Interproscan]. 0.03 OrthoFinder
Vocar.0001s1207.1 32885443 Ribosomal protein L15e [Interproscan]. 0.15 OrthoFinder
XM_002507599.1 MICPUN_55312, 55312 Ribosomal protein L15e [Interproscan]. 0.24 OrthoFinder
XM_003056506.1 MicpuC2_31849, 31849 Ribosomal protein L15e [Interproscan]. 0.06 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494151.1_4015 KAA8494151 60S ribosomal protein L15 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 2 190
No external refs found!