lcl|LHPG02000003.1_cds_PRW60117.1_6367 (PRW60117)

Aliases : PRW60117

Description : Glycosyl hydrolase isoform B

Gene families : OG_01_0000878 (OrthoFinder) Phylogenetic Tree(s): OG0000878_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000003.1_cds_PRW60117.1_6367
Cluster	HCCA: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method	Actions
SymbC1.scaffold580.6	580.6	Glycoside hydrolase, family 3, N-terminal; Glycoside...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000439	transcription factor TFIIH core complex	IEP	Enrichment
MF	GO:0003690	double-stranded DNA binding	IEP	Enrichment
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Enrichment
BP	GO:0019321	pentose metabolic process	IEP	Enrichment
BP	GO:0019566	arabinose metabolic process	IEP	Enrichment
BP	GO:0046373	L-arabinose metabolic process	IEP	Enrichment
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001764	Glyco_hydro_3_N	543	817
IPR002772	Glyco_hydro_3_C	900	1141

External Links

No external refs found!