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Aliases : PRW59901
Description : Histidyl-tRNA synthetase isoform B
Gene families : OG_01_0000761 (OrthoFinder) Phylogenetic Tree(s): OG0000761_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000003.1_cds_PRW59901.1_6743 | |
| Cluster | HCCA: Cluster_69 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre02.g142352 | 30785235 | Protein biosynthesis.aminoacyl-tRNA synthetase... | 0.03 | OrthoFinder | |
| Dusal.0128s00025.1 | 33185280 | Class II Histidinyl-tRNA synthetase (HisRS)-like... | 0.03 | OrthoFinder | |
| Sro2510_g329800.1 | Contig2511.g20544 | Histidine--tRNA ligase | 0.02 | OrthoFinder | |
| Sro390_g132850.1 | Contig4620.g34474 | Histidine--tRNA ligase | 0.01 | OrthoFinder | |
| TP05G01160.1 | No alias | Anticodon-binding; Class II Histidinyl-tRNA synthetase... | 0.02 | OrthoFinder | |
| TP17G00350.1 | No alias | Anticodon-binding; Class II Histidinyl-tRNA synthetase... | 0.02 | OrthoFinder | |
| Transcript_contig_54149 | 54149 | Anticodon-binding; Aromatic amino acid lyase; Class II... | 0.04 | OrthoFinder | |
| Transcript_contig_78819 | 78819 | Class II Histidinyl-tRNA synthetase (HisRS)-like... | 0.02 | OrthoFinder | |
| Transcript_contig_7953 | 7953 | Hypothetical protein | 0.01 | OrthoFinder | |
| Vocar.0008s0027.1 | 32897129 | Anticodon-binding; Class II Histidinyl-tRNA synthetase... | 0.02 | OrthoFinder | |
| Vocar.0017s0107.1 | 32891377 | Class II Histidinyl-tRNA synthetase (HisRS)-like... | 0.02 | OrthoFinder | |
| lcl|LHPG02000025.1_cds_PRW20175.1_5689 | PRW20175 | Histidine-tRNA chloroplastic mitochondrial | 0.03 | OrthoFinder | |
| lcl|VRMN01000004.1_cds_KAA8494724.1_3254 | KAA8494724 | Histidine--tRNA ligase, cytoplasmic | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Enrichment |
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003864 | 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | IEP | Enrichment |
| MF | GO:0003951 | NAD+ kinase activity | IEP | Enrichment |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | Enrichment |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004834 | tryptophan synthase activity | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005840 | ribosome | IEP | Enrichment |
| BP | GO:0005991 | trehalose metabolic process | IEP | Enrichment |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Enrichment |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| BP | GO:0006568 | tryptophan metabolic process | IEP | Enrichment |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Enrichment |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | Enrichment |
| BP | GO:0006606 | protein import into nucleus | IEP | Enrichment |
| BP | GO:0006739 | NADP metabolic process | IEP | Enrichment |
| BP | GO:0006741 | NADP biosynthetic process | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| BP | GO:0015939 | pantothenate metabolic process | IEP | Enrichment |
| BP | GO:0015940 | pantothenate biosynthetic process | IEP | Enrichment |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Enrichment |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
| BP | GO:0017038 | protein import | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| BP | GO:0034504 | protein localization to nucleus | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
| BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Enrichment |
| BP | GO:0051170 | import into nucleus | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | Enrichment |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Enrichment |
| MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| No external refs found! |