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Aliases : PRW59869
Description : Retinol dehydrogenase 12
Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000003.1_cds_PRW59869.1_6460 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre09.g398252 | 30780830 | Short-chain dehydrogenase TIC 32, chloroplastic... | 0.03 | OrthoFinder | |
| Dusal.0757s00012.1 | 33202075 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.02 | OrthoFinder | |
| Sro389_g132520.1 | Contig669.g7869 | Daunorubicin C-13 ketoreductase DnrU | 0.02 | OrthoFinder | |
| Sro3965_g352250.1 | Contig1669.g15029 | Dehydrogenase/reductase SDR family member on chromosome X homolog | 0.01 | OrthoFinder | |
| Sro926_g221080.1 | Contig4614.g34433 | Daunorubicin C-13 ketoreductase DnrU | 0.01 | OrthoFinder | |
| lcl|BLLF01000239.1_cds_GFH09494.1_3971 | HaLaN_04650, GFH09494 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01000911.1_cds_GFH15863.1_10340 | HaLaN_12174, GFH15863 | Short-chain dehydrogenase/reductase SDR [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | Enrichment |
| MF | GO:0003713 | transcription coactivator activity | IEP | Enrichment |
| MF | GO:0003880 | protein C-terminal carboxyl O-methyltransferase activity | IEP | Enrichment |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004671 | protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity | IEP | Enrichment |
| BP | GO:0006405 | RNA export from nucleus | IEP | Enrichment |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Enrichment |
| BP | GO:0006479 | protein methylation | IEP | Enrichment |
| BP | GO:0006481 | C-terminal protein methylation | IEP | Enrichment |
| BP | GO:0006839 | mitochondrial transport | IEP | Enrichment |
| BP | GO:0006848 | pyruvate transport | IEP | Enrichment |
| BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | Enrichment |
| BP | GO:0008213 | protein alkylation | IEP | Enrichment |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
| MF | GO:0008276 | protein methyltransferase activity | IEP | Enrichment |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Enrichment |
| CC | GO:0009507 | chloroplast | IEP | Enrichment |
| CC | GO:0009521 | photosystem | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| CC | GO:0009536 | plastid | IEP | Enrichment |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Enrichment |
| MF | GO:0010340 | carboxyl-O-methyltransferase activity | IEP | Enrichment |
| BP | GO:0015718 | monocarboxylic acid transport | IEP | Enrichment |
| BP | GO:0015979 | photosynthesis | IEP | Enrichment |
| BP | GO:0018410 | C-terminal protein amino acid modification | IEP | Enrichment |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Enrichment |
| MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | Enrichment |
| BP | GO:0043248 | proteasome assembly | IEP | Enrichment |
| BP | GO:0043687 | post-translational protein modification | IEP | Enrichment |
| BP | GO:0050657 | nucleic acid transport | IEP | Enrichment |
| BP | GO:0050658 | RNA transport | IEP | Enrichment |
| BP | GO:0051028 | mRNA transport | IEP | Enrichment |
| BP | GO:0051168 | nuclear export | IEP | Enrichment |
| BP | GO:0051236 | establishment of RNA localization | IEP | Enrichment |
| MF | GO:0051998 | protein carboxyl O-methyltransferase activity | IEP | Enrichment |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Enrichment |
| BP | GO:0098656 | anion transmembrane transport | IEP | Enrichment |
| BP | GO:1901475 | pyruvate transmembrane transport | IEP | Enrichment |
| BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
| BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002347 | SDR_fam | 14 | 139 |
| No external refs found! |