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  5. lcl|LHPG02000003.1_cds_PRW59860.1_6493

lcl|LHPG02000003.1_cds_PRW59860.1_6493 (PRW59860)


Aliases : PRW59860

Description : TPR


Gene families : OG_01_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000003.1_cds_PRW59860.1_6493
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cz14g22180.t1 No alias RAP domain; FAST kinase leucine-rich [Interproscan]. 0.03 OrthoFinder
EOD14606 No alias RAP domain [Interproscan]. 0.04 OrthoFinder
EOD15901 No alias RAP domain [Interproscan]. 0.04 OrthoFinder
EOD21247 No alias RAP domain [Interproscan]. 0.06 OrthoFinder
Sro1352_g265300.1 Contig343.g4649 RAP domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013584 RAP 602 659
IPR002885 Pentatricopeptide_repeat 1182 1208
No external refs found!