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  5. lcl|LHPG02000003.1_cds_PRW59843.1_6514

lcl|LHPG02000003.1_cds_PRW59843.1_6514 (PRW59843)


Aliases : PRW59843

Description : ATP-dependent chaperone


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000003.1_cds_PRW59843.1_6514
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000655.28 tig00000655_g2853.t1 External stimuli response.temperature.Hsp... 0.02 OrthoFinder
Cpa|evm.model.tig00001416.7 tig00001416_g8954.t1 No description available 0.02 OrthoFinder
Cz09g12050.t1 No alias Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain;... 0.02 OrthoFinder
EOD28801 No alias ATPase, AAA-type, core; Clp, N-terminal [Interproscan]. 0.01 OrthoFinder
Sro504_g156000.1 Contig4263.g32266 Protein ClpB 0.02 OrthoFinder
TP09G00210.1 No alias ATPase, AAA-type, core; Clp ATPase, C-terminal;... 0.02 OrthoFinder
TP22G00720.1 No alias ATPase, AAA-type, core; Clp ATPase, C-terminal;... 0.02 OrthoFinder
lcl|BLLF01001091.1_cds_GFH17074.1_11551 HaLaN_13618, GFH17074 ATP-dependent Clp protease ATP-binding subunit, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006527 arginine catabolic process IEP Enrichment
MF GO:0008792 arginine decarboxylase activity IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009065 glutamine family amino acid catabolic process IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016843 amine-lyase activity IEP Enrichment
MF GO:0016844 strictosidine synthase activity IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
BP GO:0043486 histone exchange IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041546 ClpA/ClpB_AAA_lid 242 316
IPR019489 Clp_ATPase_C 713 787
IPR003959 ATPase_AAA_core 455 571
IPR003959 ATPase_AAA_core 102 215
No external refs found!