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  5. lcl|LHPG02000003.1_cds_PRW59774.1_6697

lcl|LHPG02000003.1_cds_PRW59774.1_6697 (PRW59774)


Aliases : PRW59774

Description : Protease Do-like chloroplastic isoform X1


Gene families : OG_01_0000099 (OrthoFinder) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000003.1_cds_PRW59774.1_6697
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Dusal.0010s00005.1 33196819 Trypsin-like peptidase domain [Interproscan]. 0.03 OrthoFinder
Sro1351_g265220.1 Contig2702.g21765 Do-like 8, chloroplastic 0.02 OrthoFinder
Sro400_g134980.1 Contig1256.g11741 Probable periplasmic serine endoprotease DegP-like 0.01 OrthoFinder
Transcript_contig_55915 55915 PDZ domain; Trypsin-like peptidase domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01002650.1_cds_GFH24852.1_19329 HaLaN_22718, GFH24852 HtrA-like protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
CC GO:0000178 exosome (RNase complex) IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
CC GO:0001401 SAM complex IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
InterPro domains Description Start Stop
IPR001478 PDZ 340 416
No external refs found!