lcl|LHPG02000003.1_cds_PRW59746.1_6179 (PRW59746)

Aliases : PRW59746

Description : ATP-dependent DNA helicase Q-like 3 isoform X1

Gene families : OG_01_0000107 (OrthoFinder) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000003.1_cds_PRW59746.1_6179
Cluster	HCCA: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
PTI_11G03560.1	No alias	Helicase, C-terminal; ATP-dependent DNA helicase RecQ,...	0.02	OrthoFinder
Vocar.0031s0076.1	32890136	DEAD/DEAH box helicase domain [Interproscan].	0.02	OrthoFinder
XM_002502498.1	MICPUN_50295, 50295	Helicase, C-terminal; DEAD/DEAH box helicase domain...	0.02	OrthoFinder
XM_003062439.1	MicpuC2_29315, 29315	Helicase, C-terminal; ATP-dependent DNA helicase RecQ,...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000439	transcription factor TFIIH core complex	IEP	Enrichment
MF	GO:0003916	DNA topoisomerase activity	IEP	Enrichment
BP	GO:0006265	DNA topological change	IEP	Enrichment
BP	GO:0006289	nucleotide-excision repair	IEP	Enrichment
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Enrichment
BP	GO:0006813	potassium ion transport	IEP	Enrichment
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Enrichment
CC	GO:0016020	membrane	IEP	Enrichment
BP	GO:0071103	DNA conformation change	IEP	Enrichment
BP	GO:0071805	potassium ion transmembrane transport	IEP	Enrichment
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR014044	CAP_domain	333	422
IPR001650	Helicase_C	735	830
IPR011545	DEAD/DEAH_box_helicase_dom	488	653
IPR032284	RecQ_Zn-bd	843	931
IPR017923	TFIIS_N	1248	1295

External Links

No external refs found!