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  5. lcl|LHPG02000003.1_cds_PRW59679.1_6108

lcl|LHPG02000003.1_cds_PRW59679.1_6108 (PRW59679)


Aliases : PRW59679

Description : Cleavage stimulating factor 64-like


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000003.1_cds_PRW59679.1_6108
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
PTI_05G02190.1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Sro1843_g301200.1 Contig4701.g34968 SC35-like splicing factor 0.02 OrthoFinder
Sro979_g227190.1 Contig4114.g31401 29 kDa ribonucleoprotein 0.02 OrthoFinder
SymbC1.scaffold3449.2 3449.2 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Vocar.0037s0092.1 32897541 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
XM_003057264.1 MicpuC2_62347, 62347 RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
XM_003060549.1 MicpuC2_59958, 59958 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003429.1_cds_GFH27307.1_21784 HaLaN_25610, GFH27307 RRM domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0031124 mRNA 3'-end processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0046937 phytochelatin metabolic process IEP Enrichment
BP GO:0046938 phytochelatin biosynthetic process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 17 87
IPR026896 CSTF_C 407 445
IPR025742 CSTF2_hinge 151 215
No external refs found!