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  5. lcl|LHPG02000002.1_cds_PRW60746.1_4710

lcl|LHPG02000002.1_cds_PRW60746.1_4710 (PRW60746)


Aliases : PRW60746

Description : Nuclear pore complex NUP88


Gene families : OG_01_0004858 (OrthoFinder) Phylogenetic Tree(s): OG0004858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60746.1_4710
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01001271.1_cds_GFH18249.1_12726 HaLaN_15019, GFH18249 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR019321 Nucleoporin_Nup88 468 813
IPR019321 Nucleoporin_Nup88 154 243
No external refs found!