lcl|LHPG02000002.1_cds_PRW60699.1_4145 (PRW60699)


Aliases : PRW60699

Description : Hybrid sensor histidine kinase response regulator


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60699.1_4145
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.26 tig00000093_g3462.t1 Ethylene receptor 1 OS=Pelargonium hortorum 0.02 OrthoFinder
Cpa|evm.model.tig00020941.45 tig00020941_g16237.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cre02.g074150 30785488, COP5 Histidine kinase 5 OS=Arabidopsis thaliana 0.04 OrthoFinder
OT_17G01290.1 No alias Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
SymbC1.scaffold172.9 172.9 PAS fold; Signal transduction histidine kinase,... 0.02 OrthoFinder
TP03G08180.1 No alias Signal transduction response regulator, receiver domain... 0.03 OrthoFinder
Transcript_contig_89432 89432 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
Vocar.0001s0831.1 32884659 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.03 OrthoFinder
Vocar.0003s0423.1 32889392 Histidine kinase/HSP90-like ATPase; Signal transduction... 0.02 OrthoFinder
XM_002508208.1 MICPUN_84309, 84309 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
XM_003060208.1 MicpuC2_70932, 70932 Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 318 381
IPR001425 Arc/bac/fun_rhodopsins 83 284
IPR001789 Sig_transdc_resp-reg_receiver 729 846
IPR003594 HATPase_C 429 539
No external refs found!