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  5. lcl|LHPG02000002.1_cds_PRW60686.1_4506

lcl|LHPG02000002.1_cds_PRW60686.1_4506 (PRW60686)


Aliases : PRW60686

Description : Nuclear factor related to kappa-B-binding isoform X1


Gene families : OG_01_0002518 (OrthoFinder) Phylogenetic Tree(s): OG0002518_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60686.1_4506
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000008.1_cds_PRW56781.1_9688 PRW56781 Leucine-rich repeat-containing 1 0.03 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33270.1_3531 PRW33270 Small GTP-binding 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 41
No external refs found!