1. Home
  2. Species
  3. Chlorella sorokiniana
  4. Sequence
  5. lcl|LHPG02000002.1_cds_PRW60631.1_4500

lcl|LHPG02000002.1_cds_PRW60631.1_4500 (PRW60631)


Aliases : PRW60631

Description : Starch branching enzyme I


Gene families : OG_01_0000579 (OrthoFinder) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60631.1_4500
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cre06.g270100 30779786, SBE2 Carbohydrate metabolism.starch... 0.02 OrthoFinder
Cz03g10180.t1 No alias Glycosyl hydrolase, family 13, catalytic domain;... 0.02 OrthoFinder
Dusal.0286s00007.1 33201799 Glycoside hydrolase, family 13, N-terminal; Glycosyl... 0.03 OrthoFinder
Dusal.0572s00007.1 33202694 Alpha-amylase/branching enzyme, C-terminal all beta... 0.06 OrthoFinder
SymbC1.scaffold415.18 415.18 Alpha-amylase/branching enzyme, C-terminal all beta... 0.02 OrthoFinder
Vocar.0013s0009.1 32896275 Glycosyl hydrolase, family 13, catalytic domain;... 0.02 OrthoFinder
Vocar.0026s0071.1 32892436 Glycosyl hydrolase, family 13, catalytic domain;... 0.06 OrthoFinder
XM_003056443.1 MicpuC2_49461, 49461 Glycoside hydrolase family 13 protein (SBEIIA) 0.02 OrthoFinder
XM_003058527.1 MicpuC2_44337, 44337 Glycoside hydrolase family 13 protein (SBEIIB) 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493637.1_4399 KAA8493637 1,4-alpha-glucan-branching enzyme 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
BP GO:0006544 glycine metabolic process IEP Enrichment
BP GO:0006546 glycine catabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009071 serine family amino acid catabolic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 428 504
IPR006047 Glyco_hydro_13_cat_dom 571 715
IPR006048 A-amylase/branching_C 953 1055
No external refs found!