lcl|LHPG02000002.1_cds_PRW60588.1_4324 (PRW60588)


Aliases : PRW60588

Description : Methylmalonyl-mitochondrial


Gene families : OG_01_0003578 (OrthoFinder) Phylogenetic Tree(s): OG0003578_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60588.1_4324
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
PTI_06G03890.1 No alias Cobalamin (vitamin B12)-binding domain;... 0.02 OrthoFinder
Sro1741_g294660.1 Contig4311.g32512 Methylmalonyl-CoA mutase large subunit 0.02 OrthoFinder
SymbC1.scaffold7.437 7.437 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic... 0.02 OrthoFinder
Transcript_contig_60213 60213 Cobalamin (vitamin B12)-binding domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492796.1_2532 KAA8492796 Putative methylmalonyl-CoA mutase, mitochondrial 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016866 intramolecular transferase activity IEA Interproscan
MF GO:0031419 cobalamin binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0007264 small GTPase mediated signal transduction IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0019321 pentose metabolic process IEP Enrichment
BP GO:0019566 arabinose metabolic process IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046373 L-arabinose metabolic process IEP Enrichment
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006099 MeMalonylCoA_mutase_a/b_cat 58 577
IPR006158 Cobalamin-bd 621 732
No external refs found!