lcl|LHPG02000002.1_cds_PRW60577.1_4673 (PRW60577)

Aliases : PRW60577

Description : Fanconi anemia group M isoform X3

Gene families : OG_01_0002709 (OrthoFinder) Phylogenetic Tree(s): OG0002709_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|LHPG02000002.1_cds_PRW60577.1_4673
Cluster	HCCA: Cluster_25

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021350.23	tig00021350_g20640.t1	Cell cycle.mitosis and meiosis.meiotic...	0.02	OrthoFinder
PTI_14G01350.1	No alias	Helicase/UvrB, N-terminal; Helicase, C-terminal [Interproscan].	0.04	OrthoFinder
XM_003057848.1	MicpuC2_57576, 57576	Dead-box like helicase with PHD domain	0.02	OrthoFinder
lcl\|VRMN01000002.1_cds_KAA8497171.1_900	KAA8497171	Fanconi anemia group M protein-like	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Enrichment
MF	GO:0005507	copper ion binding	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment
MF	GO:0051213	dioxygenase activity	IEP	Enrichment
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	1449	1491
IPR006935	Helicase/UvrB_N	112	257
IPR001650	Helicase_C	444	553

External Links

No external refs found!