lcl|LHPG02000002.1_cds_PRW60492.1_4621 (PRW60492)


Aliases : PRW60492

Description : Geranylgeranyl transferase type-2 subunit beta-like isoform X1


Gene families : OG_01_0000594 (OrthoFinder) Phylogenetic Tree(s): OG0000594_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60492.1_4621
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
PTI_01G01400.1 No alias PFTB repeat [Interproscan]. 0.01 OrthoFinder
XM_002509075.1 MICPUN_98131, 98131 PFTB repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Enrichment
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
MF GO:0106073 dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 217 261
IPR001330 PFTB_repeat 74 115
IPR001330 PFTB_repeat 170 212
IPR001330 PFTB_repeat 121 164
IPR001330 PFTB_repeat 39 52
No external refs found!