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  5. Cpa|evm.model.tig00000489.11

Cpa|evm.model.tig00000489.11 (tig00000489_g1370.t1)


Aliases : tig00000489_g1370.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36a component


Gene families : OG_01_0005313 (OrthoFinder) Phylogenetic Tree(s): OG0005313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000489.11
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre06.g310700 30778817, RPL36a Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 OrthoFinder
Dusal.0071s00021.1 33185702 Ribosomal protein L44e [Interproscan]. 0.17 OrthoFinder
OT_17G00870.1 No alias Ribosomal protein L44e [Interproscan]. 0.25 OrthoFinder
PTI_05G04360.1 No alias Ribosomal protein L44e [Interproscan]. 0.18 OrthoFinder
Sro232_g093840.1 Contig4063.g31149 60S ribosomal protein L44 0.41 OrthoFinder
TP05G02970.1 No alias Ribosomal protein L44e [Interproscan]. 0.26 OrthoFinder
Vocar.0015s0086.1 32898998 Ribosomal protein L44e [Interproscan]. 0.15 OrthoFinder
XM_002508801.1 MICPUN_62094, 62094 Ribosomal protein L44 0.34 OrthoFinder
XM_003063940.1 MicpuC2_30148, 30148 Ribosomal protein L44e [Interproscan]. 0.13 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57355.1_8982 PRW57355 60S ribosomal L44 0.18 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496828.1_557 KAA8496828 60S ribosomal protein L44 Q 0.18 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000552 Ribosomal_L44e 17 92
No external refs found!