Cpa|evm.model.tig00000488.8 (tig00000488_g1344.t1)

Aliases : tig00000488_g1344.t1

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component

Gene families : OG_01_0000051 (OrthoFinder) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000488.8
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
EOD14617 No alias SET domain [Interproscan]. 0.02 OrthoFinder
EOD25975 No alias Pre-SET domain; SET domain [Interproscan]. 0.02 OrthoFinder
OT_03G01110.1 No alias High mobility group box domain; Zinc finger, PHD-finger;... 0.02 OrthoFinder
PTI_29G00470.1 No alias Protein kinase domain; SET domain; Cyclin, N-terminal... 0.01 OrthoFinder
Transcript_contig_54729 54729 SET domain; Pre-SET CXC domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 464 568
No external refs found!