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  5. lcl|LHPG02000002.1_cds_PRW60340.1_4744

lcl|LHPG02000002.1_cds_PRW60340.1_4744 (PRW60340)


Aliases : PRW60340

Description : Zinc finger, MYND-type [Interproscan].


Gene families : OG_01_0000408 (OrthoFinder) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60340.1_4744
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000006.1_cds_PRW57565.1_8542 PRW57565 Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45161.1_2056 PRW45161 Zinc finger MYND domain-containing 17 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP Enrichment
BP GO:0009245 lipid A biosynthetic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0019213 deacetylase activity IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0046493 lipid A metabolic process IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:1901269 lipooligosaccharide metabolic process IEP Enrichment
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002893 Znf_MYND 644 673
No external refs found!