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  5. lcl|LHPG02000002.1_cds_PRW60291.1_4729

lcl|LHPG02000002.1_cds_PRW60291.1_4729 (PRW60291)


Aliases : PRW60291

Description : Regulator of chromosome condensation RCC1


Gene families : OG_01_0003895 (OrthoFinder) Phylogenetic Tree(s): OG0003895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60291.1_4729
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cre17.g738300 30782509, RPP1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder
Dusal.0143s00014.1 33194270 60s Acidic ribosomal protein [Interproscan]. 0.01 OrthoFinder
OT_16G01900.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.03 OrthoFinder
PTI_05G03770.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.01 OrthoFinder
Sro608_g174750.1 Contig3978.g30558 60s Acidic ribosomal protein [Interproscan]. 0.01 OrthoFinder
TP09G01390.1 No alias 60s Acidic ribosomal protein [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495017.1_3547 KAA8495017 60S acidic ribosomal protein P1 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 725 773
IPR000408 Reg_chr_condens 679 719
No external refs found!