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Aliases : PRW60227
Description : Rhamnose biosynthetic enzyme 1
Gene families : OG_01_0004887 (OrthoFinder) Phylogenetic Tree(s): OG0004887_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|LHPG02000002.1_cds_PRW60227.1_4122 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre09.g387171 | 30780922 | Carbohydrate metabolism.nucleotide sugar... | 0.03 | OrthoFinder | |
| Cz04g11170.t1 | No alias | NAD-dependent epimerase/dehydratase [Interproscan]. | 0.05 | OrthoFinder | |
| Dusal.1013s00001.1 | 33187812 | RmlD-like substrate binding domain [Interproscan]. | 0.02 | OrthoFinder | |
| Sro2148_g316580.1 | Contig3130.g24844 | DTDP-4-dehydrorhamnose | 0.01 | OrthoFinder | |
| UNPLg00346.t1 | No alias | NAD-dependent epimerase/dehydratase [Interproscan]. | 0.06 | OrthoFinder | |
| lcl|BLLF01000131.1_cds_GFH08004.1_2481 | HaLaN_02898, GFH08004 | Epimerase domain-containing protein | 0.04 | OrthoFinder | |
| lcl|BLLF01002064.1_cds_GFH22552.1_17029 | HaLaN_20032, GFH22552 | RmlD_sub_bind domain-containing protein | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Enrichment |
| BP | GO:0000278 | mitotic cell cycle | IEP | Enrichment |
| CC | GO:0000775 | chromosome, centromeric region | IEP | Enrichment |
| MF | GO:0003774 | motor activity | IEP | Enrichment |
| MF | GO:0003777 | microtubule motor activity | IEP | Enrichment |
| MF | GO:0003856 | 3-dehydroquinate synthase activity | IEP | Enrichment |
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0004146 | dihydrofolate reductase activity | IEP | Enrichment |
| MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| BP | GO:0006260 | DNA replication | IEP | Enrichment |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Enrichment |
| BP | GO:0006275 | regulation of DNA replication | IEP | Enrichment |
| BP | GO:0006334 | nucleosome assembly | IEP | Enrichment |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Enrichment |
| BP | GO:0007010 | cytoskeleton organization | IEP | Enrichment |
| BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
| BP | GO:0007018 | microtubule-based movement | IEP | Enrichment |
| BP | GO:0007049 | cell cycle | IEP | Enrichment |
| BP | GO:0007051 | spindle organization | IEP | Enrichment |
| BP | GO:0007059 | chromosome segregation | IEP | Enrichment |
| MF | GO:0008017 | microtubule binding | IEP | Enrichment |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Enrichment |
| BP | GO:0008156 | negative regulation of DNA replication | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015631 | tubulin binding | IEP | Enrichment |
| BP | GO:0015689 | molybdate ion transport | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Enrichment |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0034728 | nucleosome organization | IEP | Enrichment |
| MF | GO:0042393 | histone binding | IEP | Enrichment |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0045005 | DNA-dependent DNA replication maintenance of fidelity | IEP | Enrichment |
| MF | GO:0045735 | nutrient reservoir activity | IEP | Enrichment |
| BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Enrichment |
| BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Enrichment |
| BP | GO:0048478 | replication fork protection | IEP | Enrichment |
| BP | GO:0051225 | spindle assembly | IEP | Enrichment |
| BP | GO:0051301 | cell division | IEP | Enrichment |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Enrichment |
| CC | GO:0070652 | HAUS complex | IEP | Enrichment |
| BP | GO:0070925 | organelle assembly | IEP | Enrichment |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Enrichment |
| BP | GO:0090329 | regulation of DNA-dependent DNA replication | IEP | Enrichment |
| MF | GO:0097020 | COPII receptor activity | IEP | Enrichment |
| CC | GO:0098687 | chromosomal region | IEP | Enrichment |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
| BP | GO:2000104 | negative regulation of DNA-dependent DNA replication | IEP | Enrichment |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| No external refs found! |