lcl|LHPG02000002.1_cds_PRW60224.1_4476 (PRW60224)


Aliases : PRW60224

Description : SMG8 isoform X3


Gene families : OG_01_0009577 (OrthoFinder) Phylogenetic Tree(s): OG0009577_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000002.1_cds_PRW60224.1_4476
Cluster HCCA: Cluster_42


Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006751 glutathione catabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
BP GO:0040011 locomotion IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043171 peptide catabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
BP GO:0044273 sulfur compound catabolic process IEP Enrichment
BP GO:0048870 cell motility IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR019354 Smg8/Smg9 359 484
No external refs found!