lcl|LHPG02000001.1_cds_PRW61522.1_672 (PRW61522)


Aliases : PRW61522

Description : 60S ribosomal L13-2


Gene families : OG_01_0002835 (OrthoFinder) Phylogenetic Tree(s): OG0002835_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61522.1_672
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020629.36 tig00020629_g12358.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder
Cz15g22130.t1 No alias Ribosomal protein L13e; Tetratricopeptide repeat [Interproscan]. 0.07 OrthoFinder
Dusal.0041s00032.1 33194551 Ribosomal protein L13e [Interproscan]. 0.05 OrthoFinder
EOD29349 No alias 60S ribosomal protein L13 [Ensembl]. 0.07 OrthoFinder
OT_05G05020.1 No alias Ribosomal protein L13e [Interproscan]. 0.04 OrthoFinder
PTI_20G02450.1 No alias Ribosomal protein L13e [Interproscan]. 0.1 OrthoFinder
Sro307_g113390.1 Contig2839.g22809 60S ribosomal protein L13-1 0.09 OrthoFinder
TP04G08470.1 No alias Ribosomal protein L13e [Interproscan]. 0.09 OrthoFinder
XM_002502479.1 MICPUN_90780, 90780 Ribosomal protein L13e [Interproscan]. 0.08 OrthoFinder
XM_003056868.1 MicpuC2_62462, 62462 Ribosomal protein L13e [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001412.1_cds_GFH19137.1_13614 HaLaN_16038, GFH19137 60S ribosomal protein L13 0.06 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491921.1_4929 KAA8491921 60S ribosomal protein L13-1 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001380 Ribosomal_L13e 10 184
No external refs found!