Aliases : PRW61522
Description : 60S ribosomal L13-2
Gene families : OG_01_0002835 (OrthoFinder) Phylogenetic Tree(s): OG0002835_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|LHPG02000001.1_cds_PRW61522.1_672 | |
Cluster | HCCA: Cluster_23 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020629.36 | tig00020629_g12358.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder | |
Cz15g22130.t1 | No alias | Ribosomal protein L13e; Tetratricopeptide repeat [Interproscan]. | 0.07 | OrthoFinder | |
Dusal.0041s00032.1 | 33194551 | Ribosomal protein L13e [Interproscan]. | 0.05 | OrthoFinder | |
EOD29349 | No alias | 60S ribosomal protein L13 [Ensembl]. | 0.07 | OrthoFinder | |
OT_05G05020.1 | No alias | Ribosomal protein L13e [Interproscan]. | 0.04 | OrthoFinder | |
PTI_20G02450.1 | No alias | Ribosomal protein L13e [Interproscan]. | 0.1 | OrthoFinder | |
Sro307_g113390.1 | Contig2839.g22809 | 60S ribosomal protein L13-1 | 0.09 | OrthoFinder | |
TP04G08470.1 | No alias | Ribosomal protein L13e [Interproscan]. | 0.09 | OrthoFinder | |
XM_002502479.1 | MICPUN_90780, 90780 | Ribosomal protein L13e [Interproscan]. | 0.08 | OrthoFinder | |
XM_003056868.1 | MicpuC2_62462, 62462 | Ribosomal protein L13e [Interproscan]. | 0.03 | OrthoFinder | |
lcl|BLLF01001412.1_cds_GFH19137.1_13614 | HaLaN_16038, GFH19137 | 60S ribosomal protein L13 | 0.06 | OrthoFinder | |
lcl|VRMN01000011.1_cds_KAA8491921.1_4929 | KAA8491921 | 60S ribosomal protein L13-1 | 0.08 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016872 | intramolecular lyase activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001380 | Ribosomal_L13e | 10 | 184 |
No external refs found! |