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  5. lcl|LHPG02000001.1_cds_PRW61452.1_199

lcl|LHPG02000001.1_cds_PRW61452.1_199 (PRW61452)


Aliases : PRW61452

Description : 40S ribosomal S8


Gene families : OG_01_0002728 (OrthoFinder) Phylogenetic Tree(s): OG0002728_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61452.1_199
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020610.79 tig00020610_g12025.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder
Cre06.g272800 30780026, RPS8 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Cz09g32130.t1 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.08 OrthoFinder
Dusal.0017s00011.1 33200516 Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.05 OrthoFinder
EOD23240 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.05 OrthoFinder
EOD29180 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.06 OrthoFinder
OT_14G02570.1 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.07 OrthoFinder
PTI_01G03760.1 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.1 OrthoFinder
Sro1192_g251020.1 Contig331.g4398 40S ribosomal protein S8 0.11 OrthoFinder
SymbC1.scaffold11142.1 11142.1 Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.04 OrthoFinder
TP13G01390.1 No alias Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.06 OrthoFinder
Vocar.0002s0334.1 32890975 Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.11 OrthoFinder
XM_002505379.1 MICPUN_95694, 95694 Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.03 OrthoFinder
XM_003059653.1 MicpuC2_34143, 34143 Ribosomal protein S8e/ribosomal biogenesis NSA2 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000389.1_cds_GFH11277.1_5754 HaLaN_06752, GFH11277 40S ribosomal protein S8 0.03 OrthoFinder
lcl|VRMN01000018.1_cds_KAA8490882.1_5654 KAA8490882 40S ribosomal protein S8 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 1 190
No external refs found!