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  5. lcl|LHPG02000001.1_cds_PRW61409.1_411

lcl|LHPG02000001.1_cds_PRW61409.1_411 (PRW61409)


Aliases : PRW61409

Description : NifU chloroplastic isoform A


Gene families : OG_01_0003561 (OrthoFinder) Phylogenetic Tree(s): OG0003561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61409.1_411
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021123.12 tig00021123_g18494.t1 Coenzyme metabolism.iron-sulfur cluster assembly... 0.02 OrthoFinder
Dusal.0246s00018.1 33197686 NIF system FeS cluster assembly, NifU, C-terminal [Interproscan]. 0.03 OrthoFinder
XM_002507023.1 MICPUN_113170, 113170 Iron-sulfur cluster scaffold protein, plastid precursor (NifU) 0.02 OrthoFinder
lcl|BLLF01001638.1_cds_GFH20456.1_14933 HaLaN_17580, GFH20456 Nifu-like protein chloroplastic-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0016226 iron-sulfur cluster assembly IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006448 regulation of translational elongation IEP Enrichment
BP GO:0006449 regulation of translational termination IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
BP GO:0009891 positive regulation of biosynthetic process IEP Enrichment
BP GO:0009893 positive regulation of metabolic process IEP Enrichment
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
BP GO:0010628 positive regulation of gene expression IEP Enrichment
BP GO:0031325 positive regulation of cellular metabolic process IEP Enrichment
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045727 positive regulation of translation IEP Enrichment
BP GO:0045901 positive regulation of translational elongation IEP Enrichment
BP GO:0045905 positive regulation of translational termination IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051247 positive regulation of protein metabolic process IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
InterPro domains Description Start Stop
IPR001075 NIF_FeS_clus_asmbl_NifU_C 318 379
No external refs found!