Aliases : PRW61361
Description : Left border a
Gene families : OG_01_0001088 (OrthoFinder) Phylogenetic Tree(s): OG0001088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|LHPG02000001.1_cds_PRW61361.1_387 | |
Cluster | HCCA: Cluster_43 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Transcript_contig_53976 | 53976 | NodB homology domain [Interproscan]. | 0.09 | OrthoFinder | |
Transcript_contig_57512 | 57512 | NodB homology domain [Interproscan]. | 0.06 | OrthoFinder | |
Transcript_contig_57626 | 57626 | NodB homology domain [Interproscan]. | 0.05 | OrthoFinder | |
Transcript_contig_57735 | 57735 | NodB homology domain [Interproscan]. | 0.02 | OrthoFinder | |
Transcript_contig_61498 | 61498 | Hypothetical protein | 0.05 | OrthoFinder | |
Transcript_contig_6753 | 6753 | Hypothetical protein | 0.05 | OrthoFinder | |
Transcript_contig_78124 | 78124 | NodB homology domain [Interproscan]. | 0.04 | OrthoFinder | |
Transcript_contig_79832 | 79832 | NodB homology domain [Interproscan]. | 0.02 | OrthoFinder | |
lcl|LHPG02000028.1_cds_PRW05840.1_5994 | PRW05840 | NodB homology domain [Interproscan]. | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEA | Interproscan |
BP | GO:0042742 | defense response to bacterium | IEA | Interproscan |
BP | GO:0050832 | defense response to fungus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000444 | MIS12/MIND type complex | IEP | Enrichment |
CC | GO:0000775 | chromosome, centromeric region | IEP | Enrichment |
CC | GO:0000818 | nuclear MIS12/MIND complex | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
BP | GO:0006553 | lysine metabolic process | IEP | Enrichment |
BP | GO:0007059 | chromosome segregation | IEP | Enrichment |
BP | GO:0007062 | sister chromatid cohesion | IEP | Enrichment |
BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Enrichment |
BP | GO:0008608 | attachment of spindle microtubules to kinetochore | IEP | Enrichment |
MF | GO:0008837 | diaminopimelate epimerase activity | IEP | Enrichment |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0009085 | lysine biosynthetic process | IEP | Enrichment |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Enrichment |
MF | GO:0016854 | racemase and epimerase activity | IEP | Enrichment |
MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Enrichment |
BP | GO:0022402 | cell cycle process | IEP | Enrichment |
BP | GO:0022414 | reproductive process | IEP | Enrichment |
CC | GO:0031262 | Ndc80 complex | IEP | Enrichment |
CC | GO:0031390 | Ctf18 RFC-like complex | IEP | Enrichment |
MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Enrichment |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Enrichment |
BP | GO:0045132 | meiotic chromosome segregation | IEP | Enrichment |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | Enrichment |
MF | GO:0047661 | amino-acid racemase activity | IEP | Enrichment |
BP | GO:0051315 | attachment of mitotic spindle microtubules to kinetochore | IEP | Enrichment |
CC | GO:0098687 | chromosomal region | IEP | Enrichment |
BP | GO:0098813 | nuclear chromosome segregation | IEP | Enrichment |
BP | GO:1903046 | meiotic cell cycle process | IEP | Enrichment |
BP | GO:1903047 | mitotic cell cycle process | IEP | Enrichment |
No external refs found! |