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  5. lcl|LHPG02000001.1_cds_PRW61355.1_600

lcl|LHPG02000001.1_cds_PRW61355.1_600 (PRW61355)


Aliases : PRW61355

Description : Ru large subunit-binding subunit chloroplastic isoform B


Gene families : OG_01_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61355.1_600
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001107.20 tig00001107_g7104.t1 RuBisCO large subunit-binding protein subunit alpha,... 0.01 OrthoFinder
Cre04.g231222 30791114, CPN60A External stimuli response.temperature.Hsp... 0.03 OrthoFinder
Cre06.g309100 30779697, CPN60C External stimuli response.temperature.Hsp... 0.05 OrthoFinder
Cre07.g339150 30775388, CPN60B2 External stimuli response.temperature.Hsp... 0.04 OrthoFinder
Cz07g20170.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
Cz09g09030.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Dusal.0053s00010.1 33186582 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
Dusal.0055s00013.1 33187644 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
Dusal.0817s00005.1 33195411 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
PTI_01G07800.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
TP18G01070.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54720 54720 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
XM_003064714.1 MicpuC2_43728, 43728 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495741.1_1739 KAA8495741 Chaperonin CPN60-2, mitochondrial 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 57 590
No external refs found!