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  5. lcl|LHPG02000001.1_cds_PRW61239.1_514

lcl|LHPG02000001.1_cds_PRW61239.1_514 (PRW61239)


Aliases : PRW61239

Description : Cytochrome c-type heme lyase


Gene families : OG_01_0001841 (OrthoFinder) Phylogenetic Tree(s): OG0001841_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61239.1_514
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_53934 53934 Glycosyl transferase, family 14 [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54908 54908 Glycosyl transferase, family 14 [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33249.1_3484 PRW33249 Transcription initiation factor TFIID subunit 13 isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004408 holocytochrome-c synthase activity IEA Interproscan
CC GO:0005739 mitochondrion IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 1593 1817
IPR000782 FAS1_domain 1179 1305
IPR000511 Holocyt_c/c1_synthase 65 259
IPR006342 FkbM_mtfrase 952 1092
No external refs found!