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  5. lcl|LHPG02000001.1_cds_PRW61222.1_121

lcl|LHPG02000001.1_cds_PRW61222.1_121 (PRW61222)


Aliases : PRW61222

Description : Origin recognition complex subunit 1


Gene families : OG_01_0000811 (OrthoFinder) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61222.1_121
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021070.70 tig00021070_g17875.t1 Cell cycle.interphase.DNA replication.preinitiation.CDC6... 0.03 OrthoFinder
Cre06.g292850 30778792, CDC6 No description available 0.07 OrthoFinder
Cre10.g455600 30789958, ORC1 Cell cycle.interphase.DNA... 0.08 OrthoFinder
Cz11g11020.t1 No alias Cdc6, C-terminal; AAA+ ATPase domain [Interproscan]. 0.09 OrthoFinder
EOD12119 No alias Bromo adjacent homology (BAH) domain; ATPase, AAA-type,... 0.03 OrthoFinder
EOD31487 No alias Zinc finger, PHD-finger [Interproscan]. 0.04 OrthoFinder
OT_04G00200.1 No alias Forkhead-associated (FHA) domain [Interproscan]. 0.03 OrthoFinder
OT_04G01060.1 No alias Methyl-CpG DNA binding; AAA+ ATPase domain; Cdc6,... 0.06 OrthoFinder
OT_04G05240.1 No alias Zinc finger, PHD-finger; Bromo adjacent homology (BAH)... 0.02 OrthoFinder
PTI_01G02210.1 No alias AAA+ ATPase domain [Interproscan]. 0.02 OrthoFinder
Sro395_g133970.1 Contig4272.g32316 Complex subunit 0.03 OrthoFinder
TP06G00210.1 No alias ATPase, AAA-type, core [Interproscan]. 0.02 OrthoFinder
TP10G03100.1 No alias ATPase, AAA-type, core [Interproscan]. 0.05 OrthoFinder
Transcript_contig_55058 55058 Zinc finger, PHD-finger; Bromo adjacent homology (BAH)... 0.05 OrthoFinder
Vocar.0030s0099.1 32894601 Zinc finger, PHD-finger; ATPase, AAA-type, core; AAA lid... 0.03 OrthoFinder
XM_003057583.1 MicpuC2_2525, 2525 Cdc6, C-terminal; Orc1-like, AAA ATPase domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000446.1_cds_GFH11894.1_6371 HaLaN_07472, GFH11894 Origin recognition complex subunit 1 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022414 reproductive process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
BP GO:0032780 negative regulation of ATPase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0042555 MCM complex IEP Enrichment
BP GO:0043086 negative regulation of catalytic activity IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043462 regulation of ATPase activity IEP Enrichment
BP GO:0044092 negative regulation of molecular function IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045132 meiotic chromosome segregation IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
BP GO:0051095 regulation of helicase activity IEP Enrichment
BP GO:0051097 negative regulation of helicase activity IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
BP GO:0098813 nuclear chromosome segregation IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
BP GO:1903046 meiotic cell cycle process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
BP GO:1905462 regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905463 negative regulation of DNA duplex unwinding IEP Enrichment
BP GO:1905774 regulation of DNA helicase activity IEP Enrichment
BP GO:1905775 negative regulation of DNA helicase activity IEP Enrichment
BP GO:2001251 negative regulation of chromosome organization IEP Enrichment
InterPro domains Description Start Stop
IPR041083 AAA_lid_10 669 706
IPR003959 ATPase_AAA_core 493 636
IPR001025 BAH_dom 235 353
IPR019787 Znf_PHD-finger 188 234
No external refs found!