lcl|LHPG02000001.1_cds_PRW61192.1_189 (PRW61192)


Aliases : PRW61192

Description : Abnormal spindle-like microcephaly-associated


Gene families : OG_01_0002067 (OrthoFinder) Phylogenetic Tree(s): OG0002067_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61192.1_189
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001335.3 tig00001335_g8208.t1 No description available 0.03 OrthoFinder
Cre06.g281200 30779253 No description available 0.03 OrthoFinder
Cz15g23040.t1 No alias Calponin homology domain; Abnormal spindle-like... 0.04 OrthoFinder
EOD40341 No alias Abnormal spindle-like microcephaly-associated protein,... 0.02 OrthoFinder
OT_04G04720.1 No alias Calponin homology domain; Abnormal spindle-like... 0.06 OrthoFinder
PTI_07G01790.1 No alias Calmodulin-regulated spectrin-associated protein, CH... 0.07 OrthoFinder
PTI_07G01800.1 No alias IQ motif, EF-hand binding site [Interproscan]. 0.03 OrthoFinder
Sro397_g134490.1 Contig157.g1787 Abnormal spindle-like microcephaly-associated protein... 0.04 OrthoFinder
Transcript_contig_58439 58439 IQ motif, EF-hand binding site [Interproscan]. 0.02 OrthoFinder
XM_002504783.1 MICPUN_62340, 62340 Abnormal spindle-like microcephaly-associated protein,... 0.04 OrthoFinder
XM_003060735.1 MicpuC2_60334, 60334 Calponin homology domain; IQ motif, EF-hand binding site... 0.02 OrthoFinder
lcl|BLLF01000020.1_cds_GFH06052.1_529 HaLaN_00616, GFH06052 Hypothetical protein 0.03 OrthoFinder
lcl|BLLF01001216.1_cds_GFH17877.1_12354 HaLaN_14597, GFH17877 Calponin homology domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
CC GO:0000444 MIS12/MIND type complex IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
CC GO:0000818 nuclear MIS12/MIND complex IEP Enrichment
BP GO:0002376 immune system process IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006955 immune response IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009617 response to bacterium IEP Enrichment
BP GO:0009620 response to fungus IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0022414 reproductive process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042742 defense response to bacterium IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045132 meiotic chromosome segregation IEP Enrichment
BP GO:0050832 defense response to fungus IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0098542 defense response to other organism IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
BP GO:0098813 nuclear chromosome segregation IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903046 meiotic cell cycle process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 875 894
IPR000048 IQ_motif_EF-hand-BS 1035 1053
IPR000048 IQ_motif_EF-hand-BS 898 918
IPR000048 IQ_motif_EF-hand-BS 1247 1266
IPR000048 IQ_motif_EF-hand-BS 1103 1121
IPR000048 IQ_motif_EF-hand-BS 1169 1188
IPR000048 IQ_motif_EF-hand-BS 1080 1097
IPR000048 IQ_motif_EF-hand-BS 1011 1029
IPR000048 IQ_motif_EF-hand-BS 1270 1286
IPR000048 IQ_motif_EF-hand-BS 826 844
IPR000048 IQ_motif_EF-hand-BS 943 961
IPR000048 IQ_motif_EF-hand-BS 967 985
IPR001715 CH-domain 467 566
No external refs found!