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  5. lcl|LHPG02000001.1_cds_PRW61172.1_436

lcl|LHPG02000001.1_cds_PRW61172.1_436 (PRW61172)


Aliases : PRW61172

Description : Lytic transglycosylase


Gene families : OG_01_0006487 (OrthoFinder) Phylogenetic Tree(s): OG0006487_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61172.1_436
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_58900 58900 LysM domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_59247 59247 LysM domain [Interproscan]. 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0006955 immune response IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009617 response to bacterium IEP Enrichment
BP GO:0009620 response to fungus IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0042742 defense response to bacterium IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Enrichment
BP GO:0050832 defense response to fungus IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0098542 defense response to other organism IEP Enrichment
InterPro domains Description Start Stop
IPR018392 LysM_dom 101 147
IPR018392 LysM_dom 33 78
IPR018392 LysM_dom 168 211
IPR018392 LysM_dom 241 280
No external refs found!