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  5. lcl|LHPG02000001.1_cds_PRW61060.1_157

lcl|LHPG02000001.1_cds_PRW61060.1_157 (PRW61060)


Aliases : PRW61060

Description : Cell division chloroplastic isoform A


Gene families : OG_01_0002448 (OrthoFinder) Phylogenetic Tree(s): OG0002448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61060.1_157
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020911.44 tig00020911_g15746.t1 Cell division protein FtsY homolog, chloroplastic... 0.02 OrthoFinder
Cre05.g241450 30783185, FTSY Protein translocation.chloroplast.thylakoid membrane SRP... 0.04 OrthoFinder
Cz12g26150.t1 No alias Signal recognition particle SRP54, helical bundle;... 0.04 OrthoFinder
PTI_15G03470.1 No alias Signal recognition particle, SRP54 subunit, GTPase... 0.02 OrthoFinder
Sro182_g079340.1 Contig1301.g12070 Receptor FtsY 0.01 OrthoFinder
Vocar.0017s0177.1 32891482 Signal recognition particle, SRP54 subunit, GTPase... 0.03 OrthoFinder
XM_002502775.1 MICPUN_108421, 108421 Type II secretory pathway family 0.03 OrthoFinder
lcl|VRMN01000019.1_cds_KAA8490742.1_5998 KAA8490742 Cell division protein FtsY-like, chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
InterPro domains Description Start Stop
IPR000897 SRP54_GTPase_dom 175 376
IPR013822 Signal_recog_particl_SRP54_hlx 102 153
No external refs found!