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  5. lcl|LHPG02000001.1_cds_PRW61049.1_51

lcl|LHPG02000001.1_cds_PRW61049.1_51 (PRW61049)


Aliases : PRW61049

Description : 50S ribosomal L21


Gene families : OG_01_0001206 (OrthoFinder) Phylogenetic Tree(s): OG0001206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61049.1_51
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001371.5 tig00001371_g8421.t1 50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana 0.04 OrthoFinder
Cre06.g299000 30778575, PRPL21 50S ribosomal protein L21, chloroplastic OS=Staurastrum... 0.06 OrthoFinder
Cz10g19180.t1 No alias Ribosomal protein L21-like [Interproscan]. 0.04 OrthoFinder
Dusal.0098s00017.1 33203615 Ribosomal protein L21-like [Interproscan]. 0.02 OrthoFinder
OT_07G01800.1 No alias Ribosomal protein L21-like [Interproscan]. 0.04 OrthoFinder
Sro1170_g248760.1 Contig3531.g27305 Protein L21 0.04 OrthoFinder
Vocar.0001s0246.1 32884851 Ribosomal protein L21-like [Interproscan]. 0.02 OrthoFinder
XM_002500115.1 MICPUN_89975, 89975 Ribosomal protein L21 0.03 OrthoFinder
XM_003062473.1 MicpuC2_51973, 51973 Ribosomal L21 protein, chloroplast precursor 0.03 OrthoFinder
lcl|BLLF01006389.1_cds_GFH32203.1_26680 HaLaN_31385, GFH32203 Plastid/chloroplast ribosomal protein L21 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006476 protein deacetylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016575 histone deacetylation IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0035601 protein deacylation IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0098732 macromolecule deacylation IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR028909 L21p-like 73 172
No external refs found!