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  5. lcl|LHPG02000001.1_cds_PRW61029.1_437

lcl|LHPG02000001.1_cds_PRW61029.1_437 (PRW61029)


Aliases : PRW61029

Description : Spore coat assembly domain


Gene families : OG_01_0006487 (OrthoFinder) Phylogenetic Tree(s): OG0006487_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|LHPG02000001.1_cds_PRW61029.1_437
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_58900 58900 LysM domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000021.1_cds_PRW20783.1_5005 PRW20783 Lytic transglycosylase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004525 ribonuclease III activity IEP Enrichment
MF GO:0004866 endopeptidase inhibitor activity IEP Enrichment
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0030414 peptidase inhibitor activity IEP Enrichment
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Enrichment
MF GO:0061134 peptidase regulator activity IEP Enrichment
MF GO:0061135 endopeptidase regulator activity IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR018392 LysM_dom 162 206
IPR018392 LysM_dom 101 144
IPR018392 LysM_dom 228 272
IPR018392 LysM_dom 30 78
No external refs found!